BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H03SP1|AL425031
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1481 1775 0.0
>3x_Contig1481
Length = 8252
Score = 1775 bits (894), Expect = 0.0
Identities = 895/896 (99%)
Strand = Plus / Minus
Query: 1 atccaaactatccatwtattagaataagaaccgtaatcccacactgacaattgcctttcc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3057 atccaaactatccatttattagaataagaaccgtaatcccacactgacaattgcctttcc 2998
Query: 61 acatctaattcatcgtgcgggcttcctttcgatagacgttctgaatccgattcctggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2997 acatctaattcatcgtgcgggcttcctttcgatagacgttctgaatccgattcctggaaa 2938
Query: 121 gagtcaagttcaaagtttaccacttgctcaccctggggaatggtactcagtgatgacacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 gagtcaagttcaaagtttaccacttgctcaccctggggaatggtactcagtgatgacacg 2878
Query: 181 ctggaattgagtctctgtagaaacatatgtgggttcgtcctcttatgagttgtggtcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 ctggaattgagtctctgtagaaacatatgtgggttcgtcctcttatgagttgtggtcatt 2818
Query: 241 gcgaatgataaaagaatcaacaagtcctacccgacaaaaggccaaatgctcaaccggcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817 gcgaatgataaaagaatcaacaagtcctacccgacaaaaggccaaatgctcaaccggcga 2758
Query: 301 atcgaacctcttgtcagtgtaaattgttgacttatataaatcctggtatcttgaattcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2757 atcgaacctcttgtcagtgtaaattgttgacttatataaatcctggtatcttgaattcat 2698
Query: 361 cgcggttcactgttgtgcatgctggacattgttattttacatcgatgtttcttctttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2697 cgcggttcactgttgtgcatgctggacattgttattttacatcgatgtttcttctttttc 2638
Query: 421 agggtttgttcgaggattctttcaaaataagaacatcatttgaacccagattagggaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2637 agggtttgttcgaggattctttcaaaataagaacatcatttgaacccagattagggaaag 2578
Query: 481 atagaaacaatacacatagaaccatcaaaaaaggcaatttccatagcttttgaggttaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2577 atagaaacaatacacatagaaccatcaaaaaaggcaatttccatagcttttgaggttaga 2518
Query: 541 tgggagagcgtacttcatttttgggaacctcaataaattgctagtaagaagcggacattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2517 tgggagagcgtacttcatttttgggaacctcaataaattgctagtaagaagcggacattg 2458
Query: 601 ccttagttttatataggtctctggggaaattgtttgctcagattttgaacaaaaagagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2457 ccttagttttatataggtctctggggaaattgtttgctcagattttgaacaaaaagagtt 2398
Query: 661 atgatcgattaaaatatatttactttaattaataagataaaaatgtaacgcataaagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 atgatcgattaaaatatatttactttaattaataagataaaaatgtaacgcataaagata 2338
Query: 721 tttgttaaatttattcttgaggagccaaagcagagatcttggcagcaacacgggcctttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 tttgttaaatttattcttgaggagccaaagcagagatcttggcagcaacacgggcctttc 2278
Query: 781 tttcttctctggtcaacttgacttgtctgtatttcttggattcagcagcgtattgttcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 tttcttctctggtcaacttgacttgtctgtatttcttggattcagcagcgtattgttcct 2218
Query: 841 tggtgaacttcttttcagttggcttgaaggctgggtcttctctgatagcagcgtga 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 tggtgaacttcttttcagttggcttgaaggctgggtcttctctgatagcagcgtga 2162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7536
Number of Sequences: 1807
Number of extensions: 7536
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)